From what I’ve seen, it might not be that there are some workouts that AT doesn’t look at but rather within each PL there are many other categories that are used to adapt the workouts. e.g. you probably won’t have a 5x5 VO2 workout subbed for a microburst even if they are both VO2. Just like you probably wouldn’t have 15min @97% subbed for 5 min @ 104% since those are two different types of workouts within the ‘Threshold’ umbrella.
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